Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-608 in COID Lung Bhattacharjee Cluster 39 Table contains all genes in the COID Lung Bhattacharjee cluster number 39. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-608 9575 CLOCK clock homolog (mouse) [Source:HGNC Symbol;Acc:2082] zzz999 23070 FTSJD2 FtsJ methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:21077] T 6843 VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1) [Source:HGNC Symbol;Acc:12642] P T 9820 CUL7 cullin 7 [Source:HGNC Symbol;Acc:21024] zzz999 23484 LEPROTL1 leptin receptor overlapping transcript-like 1 [Source:HGNC Symbol;Acc:6555] zzz999 8078 USP5 ubiquitin specific peptidase 5 (isopeptidase T) [Source:HGNC Symbol;Acc:12628] zzz999 25865 PRKD2 protein kinase D2 [Source:HGNC Symbol;Acc:17293] zzz999 10494 STK25 serine/threonine kinase 25 [Source:HGNC Symbol;Acc:11404] T 6311 ATXN2 ataxin 2 [Source:HGNC Symbol;Acc:10555] zzz999 9673 SLC25A44 solute carrier family 25, member 44 [Source:HGNC Symbol;Acc:29036] T 1118 CHIT1 chitinase 1 (chitotriosidase) [Source:HGNC Symbol;Acc:1936] zzz999 54623 PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25459] T 157567 ANKRD46 ankyrin repeat domain 46 [Source:HGNC Symbol;Acc:27229] zzz999 664 BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 [Source:HGNC Symbol;Acc:1084] zzz999 9727 RAB11FIP3 RAB11 family interacting protein 3 (class II) [Source:HGNC Symbol;Acc:17224] T 9203 ZMYM3 zinc finger, MYM-type 3 [Source:HGNC Symbol;Acc:13054] zzz999 2189 FANCG Fanconi anemia, complementation group G [Source:HGNC Symbol;Acc:3588] zzz999 2863 GPR39 G protein-coupled receptor 39 [Source:HGNC Symbol;Acc:4496] zzz999 7916 PRRC2A proline-rich coiled-coil 2A [Source:HGNC Symbol;Acc:13918] zzz999 1627 DBN1 drebrin 1 [Source:HGNC Symbol;Acc:2695] T 55735 DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11 [Source:HGNC Symbol;Acc:25570] T 1487 CTBP1 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:2494] zzz999 573 BAG1 BCL2-associated athanogene [Source:HGNC Symbol;Acc:937] T 4698 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa [Source:HGNC Symbol;Acc:7688] zzz999 4733 DRG1 developmentally regulated GTP binding protein 1 [Source:HGNC Symbol;Acc:3029] zzz999 10605 PAIP1 poly(A) binding protein interacting protein 1 [Source:HGNC Symbol;Acc:16945] zzz999 6861 SYT5 synaptotagmin V [Source:HGNC Symbol;Acc:11513] T 23338 PHF15 PHD finger protein 15 [Source:HGNC Symbol;Acc:22984] T 114928 GPRASP2 G protein-coupled receptor associated sorting protein 2 [Source:HGNC Symbol;Acc:25169] zzz999 9562 MINPP1 multiple inositol-polyphosphate phosphatase 1 [Source:HGNC Symbol;Acc:7102] zzz999 7166 TPH1 tryptophan hydroxylase 1 [Source:HGNC Symbol;Acc:12008] zzz999 57149 LYRM1 LYR motif containing 1 [Source:HGNC Symbol;Acc:25074] T 1031 CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:HGNC Symbol;Acc:1789] zzz999 8818 DPM2 dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:HGNC Symbol;Acc:3006] T 6253 RTN2 reticulon 2 [Source:HGNC Symbol;Acc:10468] T 10256 CNKSR1 connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:19700] zzz999 5252 PHF1 PHD finger protein 1 [Source:HGNC Symbol;Acc:8919] zzz999 40 ACCN1 amiloride-sensitive cation channel 1, neuronal [Source:HGNC Symbol;Acc:99] zzz999 4150 MAZ MYC-associated zinc finger protein (purine-binding transcription factor) [Source:HGNC Symbol;Acc:6914] P T 3376 IARS isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:5330] zzz999 7292 TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 [Source:HGNC Symbol;Acc:11934] T 100133941 zzz999 zzz999 zzz999 9110 MTMR4 myotubularin related protein 4 [Source:HGNC Symbol;Acc:7452] zzz999 11143 MYST2 MYST histone acetyltransferase 2 [Source:HGNC Symbol;Acc:17016] T 10479 SLC9A6 solute carrier family 9 (sodium/hydrogen exchanger), member 6 [Source:HGNC Symbol;Acc:11079] zzz999 8570 KHSRP KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:6316] zzz999 686 BTD biotinidase [Source:HGNC Symbol;Acc:1122] zzz999 26058 GIGYF2 GRB10 interacting GYF protein 2 [Source:HGNC Symbol;Acc:11960] T 65055 REEP1 receptor accessory protein 1 [Source:HGNC Symbol;Acc:25786] T 3191 HNRNPL heterogeneous nuclear ribonucleoprotein L [Source:HGNC Symbol;Acc:5045] zzz999 4967 OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Source:HGNC Symbol;Acc:8124] T 200081 TXLNA taxilin alpha [Source:HGNC Symbol;Acc:30685] T 6293 VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518] T 5780 PTPN9 protein tyrosine phosphatase, non-receptor type 9 [Source:HGNC Symbol;Acc:9661] zzz999 10280 SIGMAR1 sigma non-opioid intracellular receptor 1 [Source:HGNC Symbol;Acc:8157] zzz999 253982 ASPHD1 aspartate beta-hydroxylase domain containing 1 [Source:HGNC Symbol;Acc:27380] zzz999 10980 COPS6 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) [Source:HGNC Symbol;Acc:21749] zzz999 5524 PPP2R4 protein phosphatase 2A activator, regulatory subunit 4 [Source:HGNC Symbol;Acc:9308] T 9640 ZNF592 zinc finger protein 592 [Source:HGNC Symbol;Acc:28986] T 5201 PFDN1 prefoldin subunit 1 [Source:HGNC Symbol;Acc:8866] zzz999 23463 ICMT isoprenylcysteine carboxyl methyltransferase [Source:HGNC Symbol;Acc:5350] T 9604 RNF14 ring finger protein 14 [Source:HGNC Symbol;Acc:10058] zzz999 22859 LPHN1 latrophilin 1 [Source:HGNC Symbol;Acc:20973] P T

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